Centre identifies 10 labs for monitoring genomic variations in Sars-CoV-2
The ministry has also established Indian Sars-CoV-2 Genomics Consortium which will oversee the surveillance work on a regular basis and also assist in developing potential vaccines in future
The Centre has identified 10 advanced regional laboratories to serve as regional hub laboratories for genome sequencing as part of its surveillance strategy to monitor the genomic variations in the Sars-Cov-2 virus that causes coronavirus disease (Covid-19). The union health ministry’s guidance document on genomic sequencing released on Monday.

The ministry has also established Indian Sars-CoV-2 Genomics Consortium (INSACOG) which will oversee the surveillance work on a regular basis and also assist in developing potential vaccines in future.
All the genomic sequencing data will be maintained in a national database at two sites, National Institute of Biomedical Genomics, Kalyani (West Bengal), and Institute of Genomics and Integrative Biology, New Delhi.
Also Read: Centre forms genomic surveillance consortium to check spread of new coronavirus variant
Apart from ascertaining the current status of the new variant of Sars-Cov-2 virus, the project also aims to establish sentinel surveillance for early detection of genomic variants with public health implications and to determine genomic variants in unusual events or trends such as super-spreader events.
While it is known and expected that viruses constantly mutate leading to the emergence of new variants, preliminary analysis based on epidemiological and mathematical models in the UK suggests that this variant is significantly more transmissible than previously circulating variants, with an estimated potential to increase the reproductive number (R0) by 0.4 or greater with an estimated increased transmissibility of up to 70%.
However, there is no experimental evidence or indication at this point of increased infection severity associated with the aforementioned new variant. Also, few cases with the new variant have to date been reported by Denmark, Netherlands and Australia.
Belgium has also reported the new UK variant of Sars-Cov-2, according to some unconfirmed reports.
“Also, very recent media reports revealed the emergence of a second variant in UK (contacts with travellers from South Africa) and a third variant in Nigeria, suggesting continuous virus evolution,” said the health ministry document.
“In case the UK variant or any other variant mutation is detected in any sample, it will be sent to any of the two notified Covid virus repositories at RCB, Faridabad or NIV, Pune for isolating and culturing. This can then be shared as per notified guidelines for development of assays, which will help in validation of diagnostics and also testing of the vaccines under development…,” it said.
National Centre for Disease Control’s nodal unit will maintain a database of all samples of the new variants of public health significance. The data will be epidemiologically analysed, interpreted and shared with states for investigation, contact tracing and planning response strategies.
ABOUT THE AUTHORRhythma KaulRhythma Kaul is the national health editor of the Hindustan Times. She has been reporting on public health, medicine, and medical research, with a particular focus on how government decisions and health system reforms shape people’s lives. Rhythma has over 25 years of journalistic experience. She joined Hindustan Times in 2008, and has since covered everything from pandemics and infectious diseases to cutting‑edge medical research and climate‑related health challenges. Her stories routinely track the work of the Ministry of Health and Family Welfare, department of pharmaceuticals, and key national health programmes, making complex medical science and policy accessible to a wide audience. One of her prominent news breaks has been the 2012 Baby Falak case: A two-year-old brutally battered baby girl was admitted to AIIMS-Delhi with severe head injuries, multiple fractures, human bite marks, and burns. The police investigation revealed this to be a case of multi-state human-trafficking racket. She was profiled by The Wall Street Journal for breaking this story. Rhythma holds a Master’s degree from Jawaharlal Nehru University, Delhi. Prior to Hindustan Times, she worked with the India Today Group. Rhythma can be contacted at rhythma.kaul@hindustantimes.com. Her X handle is @RamblingBrook.Read More

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